Robust Regression for Machine Learning in Python
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Regression is a modeling activity that includes predicting a numerical worth given an enter.
Algorithms used for regression duties are additionally known as “regression” algorithms, with essentially the most broadly recognized and maybe most profitable being linear regression.
Linear regression suits a line or hyperplane that greatest describes the linear relationship between inputs and the goal numeric worth. If the info incorporates outlier values, the road can turn into biased, leading to worse predictive efficiency. Strong regression refers to a set of algorithms which can be sturdy within the presence of outliers in coaching knowledge.
On this tutorial, you’ll uncover sturdy regression algorithms for machine studying.
After finishing this tutorial, you’ll know:
- Strong regression algorithms can be utilized for knowledge with outliers within the enter or goal values.
- The best way to consider sturdy regression algorithms for a regression predictive modeling activity.
- The best way to examine sturdy regression algorithms utilizing their line of greatest match on the dataset.
Let’s get began.
Strong Regression for Machine Studying in Python
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Tutorial Overview
This tutorial is split into 4 elements; they’re:
- Regression With Outliers
- Regression Dataset With Outliers
- Strong Regression Algorithms
- Evaluate Strong Regression Algorithms
Regression With Outliers
Regression predictive modeling includes predicting a numeric variable given some enter, typically numerical enter.
Machine studying algorithms used for regression predictive modeling duties are additionally known as “regression” or “regression algorithms.” The most typical technique is linear regression.
Many regression algorithms are linear in that they assume that the connection between the enter variable or variables and the goal variable is linear, comparable to a line in two-dimensions, a airplane in three dimensions, and a hyperplane in larger dimensions. This can be a affordable assumption for a lot of prediction duties.
Linear regression assumes that the likelihood distribution of every variable is nicely behaved, comparable to has a Gaussian distribution. The much less nicely behaved the likelihood distribution for a function is in a dataset, the much less possible that linear regression will discover a good match.
A selected downside with the likelihood distribution of variables when utilizing linear regression is outliers. These are observations which can be far outdoors the anticipated distribution. For instance, if a variable has a Gaussian distribution, then an statement that’s Three or 4 (or extra) normal deviations from the imply is taken into account an outlier.
A dataset could have outliers on both the enter variables or the goal variable, and each could cause issues for a linear regression algorithm.
Outliers in a dataset can skew summary statistics calculated for the variable, such because the imply and normal deviation, which in flip can skew the mannequin in direction of the outlier values, away from the central mass of observations. This leads to fashions that attempt to steadiness performing nicely on outliers and regular knowledge, and performing worse on each general.
The answer as an alternative is to make use of modified variations of linear regression that particularly tackle the expectation of outliers within the dataset. These strategies are known as robust regression algorithms.
Regression Dataset With Outliers
We will outline an artificial regression dataset utilizing the make_regression() function.
On this case, we would like a dataset that we will plot and perceive simply. This may be achieved by utilizing a single enter variable and a single output variable. We don’t need the duty to be too simple, so we’ll add a considerable amount of statistical noise.
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... X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) |
As soon as we now have the dataset, we will increase it by including outliers. Particularly, we’ll add outliers to the enter variables.
This may be completed by altering a number of the enter variables to have a worth that could be a issue of the variety of normal deviations away from the imply, comparable to 2-to-4. We’ll add 10 outliers to the dataset.
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# add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() |
We will tie this collectively right into a operate that may put together the dataset. This operate can then be known as and we will plot the dataset with the enter values on the x-axis and the goal or end result on the y-axis.
The entire instance of getting ready and plotting the dataset is listed under.
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# create a regression dataset with outliers from random import random from random import randint from random import seed from sklearn.datasets import make_regression from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# load dataset X, y = get_dataset() # summarize form print(X.form, y.form) # scatter plot of enter vs output pyplot.scatter(X, y) pyplot.present() |
Working the instance creates the artificial regression dataset and provides outlier values.
The dataset is then plotted, and we will clearly see the linear relationship within the knowledge, with statistical noise, and a modest variety of outliers as factors removed from the primary mass of information.
Scatter Plot of Regression Dataset With Outliers
Now that we now have a dataset, let’s match totally different regression fashions on it.
Strong Regression Algorithms
On this part, we’ll contemplate totally different sturdy regression algorithms for the dataset.
Linear Regression (not sturdy)
Earlier than diving into sturdy regression algorithms, let’s begin with linear regression.
We will consider linear regression utilizing repeated k-fold cross-validation on the regression dataset with outliers. We’ll measure imply absolute error and this may present a decrease sure on mannequin efficiency on this activity that we would count on some sturdy regression algorithms to out-perform.
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# consider a mannequin def evaluate_model(X, y, mannequin): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic return absolute(scores) |
We will additionally plot the mannequin’s line of greatest match on the dataset. To do that, we first match the mannequin on the complete coaching dataset, then create an enter dataset that could be a grid throughout the complete enter area, make a prediction for every, then draw a line for the inputs and predicted outputs.
This plot exhibits how the mannequin “sees” the issue, particularly the connection between the enter and output variables. The thought is that the road will probably be skewed by the outliers when utilizing linear regression.
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# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, mannequin): # fut the mannequin on all knowledge mannequin.match(X, y) # plot the dataset pyplot.scatter(X, y) # plot the road of greatest match xaxis = arange(X.min(), X.max(), 0.01) yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) pyplot.plot(xaxis, yaxis, shade=‘r’) # present the plot pyplot.title(kind(mannequin).__name__) pyplot.present() |
Tying this collectively, the entire instance for linear regression is listed under.
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# linear regression on a dataset with outliers from random import random from random import randint from random import seed from numpy import arange from numpy import imply from numpy import std from numpy import absolute from sklearn.datasets import make_regression from sklearn.linear_model import LinearRegression from sklearn.model_selection import cross_val_score from sklearn.model_selection import RepeatedKFold from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# consider a mannequin def evaluate_model(X, y, mannequin): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic return absolute(scores)
# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, mannequin): # fut the mannequin on all knowledge mannequin.match(X, y) # plot the dataset pyplot.scatter(X, y) # plot the road of greatest match xaxis = arange(X.min(), X.max(), 0.01) yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) pyplot.plot(xaxis, yaxis, shade=‘r’) # present the plot pyplot.title(kind(mannequin).__name__) pyplot.present()
# load dataset X, y = get_dataset() # outline the mannequin mannequin = LinearRegression() # consider mannequin outcomes = evaluate_model(X, y, mannequin) print(‘Imply MAE: %.3f (%.3f)’ % (imply(outcomes), std(outcomes))) # plot the road of greatest match plot_best_fit(X, y, mannequin) |
Working the instance first stories the imply MAE for the mannequin on the dataset.
We will see that linear regression achieves a MAE of about 5.2 on this dataset, offering an upper-bound in error.
Subsequent, the dataset is plotted as a scatter plot exhibiting the outliers and that is overlaid with the road of greatest match from the linear regression algorithm.
On this case, we will see that the road of greatest match will not be aligning with the info and it has been skewed by the outliers. In flip, we count on this has precipitated the mannequin to have a worse-than-expected efficiency on the dataset.
Line of Finest Match for Linear Regression on a Dataset with Outliers
Huber Regression
Huber regression is a kind of strong regression that’s conscious of the opportunity of outliers in a dataset and assigns them much less weight than different examples within the dataset.
We will use Huber regression through the HuberRegressor class in scikit-learn. The “epsilon” argument controls what is taken into account an outlier, the place smaller values contemplate extra of the info outliers, and in flip, make the mannequin extra sturdy to outliers. The default is 1.35.
The instance under evaluates Huber regression on the regression dataset with outliers, first evaluating the mannequin with repeated cross-validation after which plotting the road of greatest match.
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# huber regression on a dataset with outliers from random import random from random import randint from random import seed from numpy import arange from numpy import imply from numpy import std from numpy import absolute from sklearn.datasets import make_regression from sklearn.linear_model import HuberRegressor from sklearn.model_selection import cross_val_score from sklearn.model_selection import RepeatedKFold from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# consider a mannequin def evaluate_model(X, y, mannequin): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic return absolute(scores)
# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, mannequin): # fut the mannequin on all knowledge mannequin.match(X, y) # plot the dataset pyplot.scatter(X, y) # plot the road of greatest match xaxis = arange(X.min(), X.max(), 0.01) yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) pyplot.plot(xaxis, yaxis, shade=‘r’) # present the plot pyplot.title(kind(mannequin).__name__) pyplot.present()
# load dataset X, y = get_dataset() # outline the mannequin mannequin = HuberRegressor() # consider mannequin outcomes = evaluate_model(X, y, mannequin) print(‘Imply MAE: %.3f (%.3f)’ % (imply(outcomes), std(outcomes))) # plot the road of greatest match plot_best_fit(X, y, mannequin) |
Working the instance first stories the imply MAE for the mannequin on the dataset.
We will see that Huber regression achieves a MAE of about 4.435 on this dataset, outperforming the linear regression mannequin within the earlier part.
Subsequent, the dataset is plotted as a scatter plot exhibiting the outliers and that is overlaid with the road of greatest match from the algorithm.
On this case, we will see that the road of greatest match is healthier aligned with the primary physique of the info, and doesn’t look like clearly influenced by the outliers which can be current.
Line of Finest Match for Huber Regression on a Dataset with Outliers
RANSAC Regression
Random Sample Consensus, or RANSAC for brief, is one other sturdy regression algorithm.
RANSAC tries to separate knowledge into outliers and inliers and suits the mannequin on the inliers.
The scikit-learn library gives an implementation through the RANSACRegressor class.
The instance under evaluates RANSAC regression on the regression dataset with outliers, first evaluating the mannequin with repeated cross-validation after which plotting the road of greatest match.
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# ransac regression on a dataset with outliers from random import random from random import randint from random import seed from numpy import arange from numpy import imply from numpy import std from numpy import absolute from sklearn.datasets import make_regression from sklearn.linear_model import RANSACRegressor from sklearn.model_selection import cross_val_score from sklearn.model_selection import RepeatedKFold from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# consider a mannequin def evaluate_model(X, y, mannequin): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic return absolute(scores)
# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, mannequin): # fut the mannequin on all knowledge mannequin.match(X, y) # plot the dataset pyplot.scatter(X, y) # plot the road of greatest match xaxis = arange(X.min(), X.max(), 0.01) yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) pyplot.plot(xaxis, yaxis, shade=‘r’) # present the plot pyplot.title(kind(mannequin).__name__) pyplot.present()
# load dataset X, y = get_dataset() # outline the mannequin mannequin = RANSACRegressor() # consider mannequin outcomes = evaluate_model(X, y, mannequin) print(‘Imply MAE: %.3f (%.3f)’ % (imply(outcomes), std(outcomes))) # plot the road of greatest match plot_best_fit(X, y, mannequin) |
Working the instance first stories the imply MAE for the mannequin on the dataset.
We will see that RANSAC regression achieves a MAE of about 4.454 on this dataset, outperforming the linear regression mannequin however maybe not Huber regression.
Subsequent, the dataset is plotted as a scatter plot exhibiting the outliers, and that is overlaid with the road of greatest match from the algorithm.
On this case, we will see that the road of greatest match is aligned with the primary physique of the info, even perhaps higher than the plot for Huber regression.
Line of Finest Match for RANSAC Regression on a Dataset with Outliers
Theil Sen Regression
Theil Sen regression includes becoming a number of regression fashions on subsets of the coaching knowledge and mixing the coefficients collectively ultimately.
The scikit-learn gives an implementation through the TheilSenRegressor class.
The instance under evaluates Theil Sen regression on the regression dataset with outliers, first evaluating the mannequin with repeated cross-validation after which plotting the road of greatest match.
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# theilsen regression on a dataset with outliers from random import random from random import randint from random import seed from numpy import arange from numpy import imply from numpy import std from numpy import absolute from sklearn.datasets import make_regression from sklearn.linear_model import TheilSenRegressor from sklearn.model_selection import cross_val_score from sklearn.model_selection import RepeatedKFold from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# consider a mannequin def evaluate_model(X, y, mannequin): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic return absolute(scores)
# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, mannequin): # fut the mannequin on all knowledge mannequin.match(X, y) # plot the dataset pyplot.scatter(X, y) # plot the road of greatest match xaxis = arange(X.min(), X.max(), 0.01) yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) pyplot.plot(xaxis, yaxis, shade=‘r’) # present the plot pyplot.title(kind(mannequin).__name__) pyplot.present()
# load dataset X, y = get_dataset() # outline the mannequin mannequin = TheilSenRegressor() # consider mannequin outcomes = evaluate_model(X, y, mannequin) print(‘Imply MAE: %.3f (%.3f)’ % (imply(outcomes), std(outcomes))) # plot the road of greatest match plot_best_fit(X, y, mannequin) |
Working the instance first stories the imply MAE for the mannequin on the dataset.
We will see that Theil Sen regression achieves a MAE of about 4.371 on this dataset, outperforming the linear regression mannequin in addition to RANSAC and Huber regression.
Subsequent, the dataset is plotted as a scatter plot exhibiting the outliers, and that is overlaid with the road of greatest match from the algorithm.
On this case, we will see that the road of greatest match is aligned with the primary physique of the info.
Line of Finest Match for Theil Sen Regression on a Dataset with Outliers
Evaluate Strong Regression Algorithms
Now that we’re aware of some in style sturdy regression algorithms and learn how to use them, we will have a look at how we would examine them straight.
It may be helpful to run an experiment to straight examine the sturdy regression algorithms on the identical dataset. We will examine the imply efficiency of every technique, and extra usefully, use instruments like a field and whisker plot to check the distribution of scores throughout the repeated cross-validation folds.
The entire instance is listed under.
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# examine sturdy regression algorithms on a regression dataset with outliers from random import random from random import randint from random import seed from numpy import imply from numpy import std from numpy import absolute from sklearn.datasets import make_regression from sklearn.model_selection import cross_val_score from sklearn.model_selection import RepeatedKFold from sklearn.linear_model import LinearRegression from sklearn.linear_model import HuberRegressor from sklearn.linear_model import RANSACRegressor from sklearn.linear_model import TheilSenRegressor from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# dictionary of mannequin names and mannequin objects def get_models(): fashions = dict() fashions[‘Linear’] = LinearRegression() fashions[‘Huber’] = HuberRegressor() fashions[‘RANSAC’] = RANSACRegressor() fashions[‘TheilSen’] = TheilSenRegressor() return fashions
# consider a mannequin def evalute_model(X, y, mannequin, identify): # outline mannequin analysis technique cv = RepeatedKFold(n_splits=10, n_repeats=3, random_state=1) # consider mannequin scores = cross_val_score(mannequin, X, y, scoring=‘neg_mean_absolute_error’, cv=cv, n_jobs=–1) # drive scores to be optimistic scores = absolute(scores) return scores
# load the dataset X, y = get_dataset() # retrieve fashions fashions = get_models() outcomes = dict() for identify, mannequin in fashions.gadgets(): # consider the mannequin outcomes[name] = evalute_model(X, y, mannequin, identify) # summarize progress print(‘>%s %.3f (%.3f)’ % (identify, imply(outcomes[name]), std(outcomes[name]))) # plot mannequin efficiency for comparability pyplot.boxplot(outcomes.values(), labels=outcomes.keys(), showmeans=True) pyplot.present() |
Working the instance evaluates every mannequin in flip, reporting the imply and normal deviation MAE scores of attain.
Be aware: your particular outcomes will differ given the stochastic nature of the educational algorithms and analysis process. Attempt operating the instance a couple of instances.
We will see some minor variations between these scores and people reported within the earlier part, though the variations could or will not be statistically vital. The overall sample of the sturdy regression strategies performing higher than linear regression holds, TheilSen reaching higher efficiency than the opposite strategies.
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>Linear 5.260 (1.149) >Huber 4.435 (1.868) >RANSAC 4.405 (2.206) >TheilSen 4.371 (1.961) |
A plot is created exhibiting a field and whisker plot summarizing the distribution of outcomes for every evaluated algorithm.
We will clearly see the distributions for the sturdy regression algorithms sitting and lengthening decrease than the linear regression algorithm.
Field and Whisker Plot of MAE Scores for Strong Regression Algorithms
It might even be fascinating to check sturdy regression algorithms based mostly on a plot of their line of greatest match.
The instance under suits every sturdy regression algorithm and plots their line of greatest match on the identical plot within the context of a scatter plot of the complete coaching dataset.
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# plot line of greatest for a number of sturdy regression algorithms from random import random from random import randint from random import seed from numpy import arange from sklearn.datasets import make_regression from sklearn.linear_model import LinearRegression from sklearn.linear_model import HuberRegressor from sklearn.linear_model import RANSACRegressor from sklearn.linear_model import TheilSenRegressor from matplotlib import pyplot
# put together the dataset def get_dataset(): X, y = make_regression(n_samples=100, n_features=1, tail_strength=0.9, effective_rank=1, n_informative=1, noise=3, bias=50, random_state=1) # add some synthetic outliers seed(1) for i in vary(10): issue = randint(2, 4) if random() > 0.5: X[i] += issue * X.std() else: X[i] -= issue * X.std() return X, y
# dictionary of mannequin names and mannequin objects def get_models(): fashions = listing() fashions.append(LinearRegression()) fashions.append(HuberRegressor()) fashions.append(RANSACRegressor()) fashions.append(TheilSenRegressor()) return fashions
# plot the dataset and the mannequin’s line of greatest match def plot_best_fit(X, y, xaxis, mannequin): # match the mannequin on all knowledge mannequin.match(X, y) # calculate outputs for grid throughout the area yaxis = mannequin.predict(xaxis.reshape((len(xaxis), 1))) # plot the road of greatest match pyplot.plot(xaxis, yaxis, label=kind(mannequin).__name__)
# load the dataset X, y = get_dataset() # outline a uniform grid throughout the enter area xaxis = arange(X.min(), X.max(), 0.01) for mannequin in get_models(): # plot the road of greatest match plot_best_fit(X, y, xaxis, mannequin) # plot the dataset pyplot.scatter(X, y) # present the plot pyplot.title(‘Strong Regression’) pyplot.legend() pyplot.present() |
Working the instance creates a plot exhibiting the dataset as a scatter plot and the road of greatest match for every algorithm.
We will clearly see the off-axis line for the linear regression algorithm and the a lot better traces for the sturdy regression algorithms that comply with the primary physique of the info.
Comparability of Strong Regression Algorithms Line of Finest Match
Additional Studying
This part gives extra sources on the subject in case you are seeking to go deeper.
APIs
Articles
Abstract
On this tutorial, you found sturdy regression algorithms for machine studying.
Particularly, you realized:
- Strong regression algorithms can be utilized for knowledge with outliers within the enter or goal values.
- The best way to consider sturdy regression algorithms for a regression predictive modeling activity.
- The best way to examine sturdy regression algorithms utilizing their line of greatest match on the dataset.
Do you may have any questions?
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